Make your own free website on Tripod.com

FRONTPAGE


INTRODUCTION


STRUCTURE


MACHINERY


BIOSYNTHESIS


REFERENCES


GALLERY


Webpage creator
Jorge Ramos
HOMEPAGE
E-MAIL LINK

CHARMM software developer
Themis Lazaridis
HOMEPAGE

BICM 88900 instructor
Manfred Philipp
HOMEPAGE

TEXT (t) REFERENCES FOR STUDENTS


t1.Zuber, H., Sidler, W., Fuglistaller, P., Brunisholz, R.,and Theiler, R., Molecular Biology of the Photosynthetic Apparatus, pp 183-195. Structural Studies on the Light-Harvesting Polypeptides from Cianobacteria and Bacteria. Cold Spring Harbor Laboratory, New York, 1985.
t2.Voet, D., Voet, J., Lehrbuch der Biochemie, pp 529-561. Wiley-VCH 2002
t3.Loach, P.,Parkes, P., Miller, J., Hinchigeri, S., and Callahan, P., Molecular Biology of the Photosynthetic Apparatus, pp 197-209. Structure-Function Relationships of the Bacteriochlorophyll-Protein Light-Harvesting Complex of Rhodospirillum rubrum. Cold Spring Harbor Laboratory, New York, 1985.
t4.Danks, S., Evans, E., and Whittaker, P., Photosynthetic Systems, Structure, Function and Assembly pp 36-77. Photosynthetic Phosphorilation. Wiley, New York, 1983.
t5.Danks, S., Evans, E., and Whittaker, P., Biology, The World of life pp 189-202. Advances in Genetics. Scott Foresman and Company, Illinois, 1990.
t6.Cotton, F., Wilkinson, and G., Gaus, P., Basic Inorganic Chemistry. Aspects of Simmetry and Point Groups, pp 785-810. Wiley, 1976.
t7.Gerloch, M., Orbitals, Terms, and States. Wiley, New York, 1986.
t8.Peter W. Atkins, Kurzlehrbuch Physikalische Chemie pp 654-659. Wiley-VCH, 1999.
t9.Apel, K. (1979). Phytochrome-induced appearance of mRNA activity for the apoprotein of the light harvesting clorophyll a/b protein of barley(Hordeum vulgare). Eur. J. Biochem. 97:183-188.
t10.Hoober, J. (1984). Biosynthetic Pathways and regulation. Chloroplasts, pp 223-234. Plenum Press, New York.
t11.Govindjee, Amesz, J., Fork, D. (1986). Fuorescence of Pigments in Vitro. Light emmission by Plants and Bacteria, pp 104-105. Academic Press, Florida.
t12.Prigogine, I. (1976). Termodinámica de la vida. Biología Molecular, pp 199-204. H. Blume Ediciones, Madrid, España.


INTERNET (i) REFERENCES FOR SLACKERS


i1.Fulcher, T. K., J. T. Beatty, and M. R. Jones. 1998. A demonstration of the key role played by the PufX protein in the functional and structural organization of native and hybrid bacterial photosynthetic core complexes. J. Bacteriol. 180:642-646 [Abstract/Full Text].
i2.Hu, X., and K. Schulten. 1998. A model for the light harvesting complex 1 (B875) of Rhodobacter sphaeroides. Biophys. J. 75:683-694 [Abstract/Full Text].
i3.Hu, X., T. R. Damjanovic, and K. Schulten. 1998. Architecture and function of the light-harvesting apparatus of purple bacteria. Proc. Natl. Acad. Sci. USA 95:5935-5941 [Abstract/Full Text].
i4.Jungas, C., J.-L. Ranck, J.-L. Rijaud, P. Joliot, and A. Verméglio. 1999. Supramolecular organisation of the photosynthetic apparatus of Rhodobacter sphaeroides. EMBO J. 18:534-542 [Abstract/Full Text].
i5.McGlynn, P., W. H. J. Westerhuis, M. R. Jones, and C. N. Hunter. 1996. Consequences for the organisation of reaction centre LH1 core complexes of Rhodobacter sphaeroides arising from/by deletion of amino acid residues from the C-terminus of the LH1 -polypeptide. J. Biol. Chem. 271:3285-3292 [Abstract/Full Text].
i6.Pinta, V., Picaud, M., Reiss-Husson, F., Astier, C. (2002). Rubrivivax gelatinosus acsF (Previously orf358) Codes for a Conserved, Putative Binuclear-Iron-Cluster-Containing Protein Involved in Aerobic Oxidative Cyclization of Mg-Protoporphyrin IX Monomethylester. J. Bacteriol. 184: 746-753
[Abstract/Full Text].

i7.Yurkov, V. V., and J. T. Beatty. 1998. Aerobic anoxygenic phototrophic bacteria. Microbiol Mol. Biol. Rev. 62:695-724. [Abstract/Full Text].
i8.Vasil'ev, S. , Orth, P. , Zouni, A. , Owens, T. G. & Bruce, D. (2001) Proc. Natl. Acad. Sci. USA 98, 8602-8607
[Abstract/Full Text].

i9.Kuhl, H. , Kruip, J. , Seidler, A. , Krieger-Liszkay, A. , Bunker, A. , Bald, D. , Scheidig, A. J. & Rogner, M. (2000) J. Biol. Chem. 275, 20652-20659 [Abstract/Full Text].
i10.Nishiyama, Y., Hayashi, H., Watanabe, T., and Murata, N. (1994) Plant Physiol. 105, 1313-1319 [Abstract/Full Text].


SOFTWARE AND ELECTRONIC RESOURCES

3D graphics:Rhinoceros 3D, RasMol, CN3D, Chime
Enzyme kinetics:Vinny Graphics, Spread32
2D molecular graphics:IsisDraw, Chemsketch, MS Paint
Animation:MS Gif Animator
Graphics editing:MS Paint, UltraSnap
Protein sequence analysis:AntheProt, BioEdit, ConSurf
Molecular Dynamics:CHARMM, VMD
Others:MutaProt, 3D-Jigsaw, Boston University PDB mirror, Inorganic Crystal Structure Database, Cambridge Crystallographic Database